cellxgene_VIP
Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also performs differential gene expression analysis and provides a Command Line Interface (CLI) for advanced users to perform analysis using python and R.
How to download and setup cellxgene_VIP
Open terminal and run command
git clone https://github.com/interactivereport/cellxgene_VIP.git
git clone is used to create a copy or clone of cellxgene_VIP repositories.
You pass git clone a repository URL. it supports a few different network protocols and corresponding URL formats.
Also you may download zip file with cellxgene_VIP https://github.com/interactivereport/cellxgene_VIP/archive/master.zip
Or simply clone cellxgene_VIP with SSH
[email protected]:interactivereport/cellxgene_VIP.git
If you have some problems with cellxgene_VIP
You may open issue on cellxgene_VIP support forum (system) here: https://github.com/interactivereport/cellxgene_VIP/issuesSimilar to cellxgene_VIP repositories
Here you may see cellxgene_VIP alternatives and analogs
three.js echarts svgo popmotion viz plotly.js c3 rickshaw vega visx plotly.py britecharts vprof billboard.js flask_jsondash ngx-charts planetary.js markvis resonance osmnx js-code-to-svg-flowchart MaterialDesign minify svgo Snowflake DiagrammeR sharp octicons metabase arcan