WES

quality

Whole Exome Sequencing end-to-end pipeline. Starting from whole exome fastq files: Data QC, Adapter Trimming, Reference Genome Alignment, SAM/BAM Validation, Data Recalibration and Variant Calling.

How to download and setup WES

Open terminal and run command

git clone https://github.com/mehdimerbah/WES.git

git clone is used to create a copy or clone of WES repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with WES https://github.com/mehdimerbah/WES/archive/master.zip

Or simply clone WES with SSH

[email protected]:mehdimerbah/WES.git

If you have some problems with WES

You may open issue on WES support forum (system) here: https://github.com/mehdimerbah/WES/issues

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