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clean-fastq

A workflow designed to clean fastq files for the SEACONNECT project

How to download and setup clean-fastq

Open terminal and run command
git clone https://github.com/Grelot/clean-fastq.git
git clone is used to create a copy or clone of clean-fastq repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with clean-fastq https://github.com/Grelot/clean-fastq/archive/master.zip

Or simply clone clean-fastq with SSH
[email protected]:Grelot/clean-fastq.git

If you have some problems with clean-fastq

You may open issue on clean-fastq support forum (system) here: https://github.com/Grelot/clean-fastq/issues