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fastq_utils

Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.

How to download and setup fastq_utils

Open terminal and run command
git clone https://github.com/nunofonseca/fastq_utils.git
git clone is used to create a copy or clone of fastq_utils repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with fastq_utils https://github.com/nunofonseca/fastq_utils/archive/master.zip

Or simply clone fastq_utils with SSH
[email protected]:nunofonseca/fastq_utils.git

If you have some problems with fastq_utils

You may open issue on fastq_utils support forum (system) here: https://github.com/nunofonseca/fastq_utils/issues