lh3

lh3

👤 Developer

40 repositories on SrcLog

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40 Repos
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Repositories (40)

CHM-eval lh3/CHM-eval TeX
55
etrf lh3/etrf C

Exact Tandem Repeat Finder (not a TRF replacement)

51
miniwfa lh3/miniwfa C

A reimplementation of the WaveFront Alignment algorithm at low memory

50
jstreeview lh3/jstreeview JavaScript

Interactive phylogenetic tree viewer/editor

49
sdust lh3/sdust C

Symmetric DUST for finding low-complexity regions in DNA sequences

45
bioseq-js lh3/bioseq-js HTML

For live demo, see http://lh3lh3.users.sourceforge.net/bioseq.shtml

35
partig lh3/partig C

An experimental tool to estimate the similarity between all pairs of contigs

33
klib.nim lh3/klib.nim Nim

Experimental getopt, gzip reader, FASTA/Q parser and interval queries in nim-lang

32
fermi2 lh3/fermi2 C
25
calN50 lh3/calN50 JavaScript

Compute N50/NG50 and auN/auNG

23