Randomly subsample sequencing reads or alignments
Genome size estimation from long read overlaps
Remove human reads from a sequencing run
Benchmarking FASTQ compression with 'mature' compression algorithms
A lightweight library for working with PAF (Pairwise mApping Format) files
Extract subsets of ONT (Nanopore) reads based on time
A small python program to simulate a real-time Nanopore sequencing run based on a previous experiment.
Repository with all my container recipes 👩🍳
Real-time species-typing visualisation for nanopore data.