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Repositories (4)
scATAC-benchmarking
pinellolab/scATAC-benchmarking
Jupyter Notebook
Benchmarking computational single cell ATAC-seq methods
186
38
STREAM
pinellolab/STREAM
Jupyter Notebook
STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data
184
50
chorus
pinellolab/chorus
Python
One interface to nine genomic deep-learning oracles — variant effect prediction, calibrated per-track percentiles, and plain-English analysis through MCP.
62
10
GRAFIMO
pinellolab/GRAFIMO
Python
GRAph-based Finding of Individual Motif Occurrences
23
2