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pairsqc

QC report generator for Hi-C pairs file

How to download and setup pairsqc

Open terminal and run command
git clone https://github.com/4dn-dcic/pairsqc.git
git clone is used to create a copy or clone of pairsqc repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with pairsqc https://github.com/4dn-dcic/pairsqc/archive/master.zip

Or simply clone pairsqc with SSH
[email protected]:4dn-dcic/pairsqc.git

If you have some problems with pairsqc

You may open issue on pairsqc support forum (system) here: https://github.com/4dn-dcic/pairsqc/issues

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