MegaPath

filter

MegaPath: sensitive and rapid pathogen detection using metagenomic NGS data; MegaPath-Amplicon: filtering module for metagenomic amplicon data

How to download and setup MegaPath

Open terminal and run command

git clone https://github.com/HKU-BAL/MegaPath.git

git clone is used to create a copy or clone of MegaPath repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with MegaPath https://github.com/HKU-BAL/MegaPath/archive/master.zip

Or simply clone MegaPath with SSH

[email protected]:HKU-BAL/MegaPath.git

If you have some problems with MegaPath

You may open issue on MegaPath support forum (system) here: https://github.com/HKU-BAL/MegaPath/issues

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