bowtie2

bioinformatics

A fast and sensitive gapped read aligner

How to download and setup bowtie2

Open terminal and run command

git clone https://github.com/BenLangmead/bowtie2.git

git clone is used to create a copy or clone of bowtie2 repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with bowtie2 https://github.com/BenLangmead/bowtie2/archive/master.zip

Or simply clone bowtie2 with SSH

[email protected]:BenLangmead/bowtie2.git

If you have some problems with bowtie2

You may open issue on bowtie2 support forum (system) here: https://github.com/BenLangmead/bowtie2/issues

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