shenwei356

shenwei356

👤 Developer

14 repositories on SrcLog

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14 Repos
5.5k Stars
654 Forks
5.5k Watchers

Repositories (14)

seqkit shenwei356/seqkit Go

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

1.5k
csvtk shenwei356/csvtk Go

A cross-platform, efficient and practical CSV/TSV toolkit in Golang

1.2k
rush shenwei356/rush Go

A cross-platform command-line tool for executing jobs in parallel

1.1k
awesome shenwei356/awesome

Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stuff.

755
taxonkit shenwei356/taxonkit Go

A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV

469
perfect-bioinformatic-tools shenwei356/perfect-bioinformatic-tools

What should perfect bioinformatic tools be like?

146
bio_scripts shenwei356/bio_scripts Perl

Practical, reusable scripts for bioinformatics

102
bio shenwei356/bio Go

A lightweight and high-performance bioinformatics package in Golang

96
gtdb-taxdump shenwei356/gtdb-taxdump R

GTDB taxonomy taxdump files with trackable TaxIds

57
go4bio shenwei356/go4bio

Golang for Bioinformatics

31
countminsketch shenwei356/countminsketch Go

An implementation of Count-Min Sketch in Golang

22
bwt shenwei356/bwt Go

Burrows-Wheeler Transform and FM-index in golang

19
gtaxon shenwei356/gtaxon Go

gTaxon - a fast cross-platform NCBI taxonomy data querying (gi2taxid, taxid2taxon, name2taxid, LCA) tool, with cmd client and REST API server for both local and remote server.

15
util shenwei356/util Go

Golang utility packages

4