hantavirus-pipeline
aleponce4
Bioinformatics pipeline for processing Hantavirus NGS data with a two-pass approach. Implements quality control, reference-based mapping, metaconsensus refinement, variant calling, and automatic negative sample detection. Features include primer evaluation, coverage visualization, and comparison between consensus sequences.
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1 data points · 2025-07-23 → 2025-07-23How do you feel about this project?
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Question copied to clipboardWhat is the aleponce4/hantavirus-pipeline GitHub project? Description: "Bioinformatics pipeline for processing Hantavirus NGS data with a two-pass approach. Implements quality control, reference-based mapping, metaconsensus refinement, variant calling, and automatic negative sample detection. Features include primer evaluation, coverage visualization, and comparison between consensus sequences.". Written in Python. Explain what it does, its main use cases, key features, and who would benefit from using it.
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