hantavirus-ngs-workflow

Bioinformatics pipeline for processing Hantavirus NGS data with a two-pass approach. Implements quality control, reference-based mapping, metaconsensus refinement, variant calling, and automatic negative sample detection. Features include primer evaluation, coverage visualization, and comparison between consensus sequences.

consensus

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Python Language

30 SrcLog Score

Cost to Build

$3.7K

Market Value

$500

How is this calculated?

Growth over time

2 data points · 2025-07-23 → 2026-04-12

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What is the aleponce4/hantavirus-ngs-workflow GitHub project? Description: "Bioinformatics pipeline for processing Hantavirus NGS data with a two-pass approach. Implements quality control, reference-based mapping, metaconsensus refinement, variant calling, and automatic negative sample detection. Features include primer evaluation, coverage visualization, and comparison between consensus sequences.". Written in Python. Explain what it does, its main use cases, key features, and who would benefit from using it.

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git clone https://github.com/aleponce4/hantavirus-ngs-workflow.git

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Download master.zip

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