jbrowse

bioinformatics

JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.

How to download and setup jbrowse

Open terminal and run command

git clone https://github.com/GMOD/jbrowse.git

git clone is used to create a copy or clone of jbrowse repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with jbrowse https://github.com/GMOD/jbrowse/archive/master.zip

Or simply clone jbrowse with SSH

[email protected]:GMOD/jbrowse.git

If you have some problems with jbrowse

You may open issue on jbrowse support forum (system) here: https://github.com/GMOD/jbrowse/issues

Similar to jbrowse repositories

Here you may see jbrowse alternatives and analogs

cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba bionode csvtk biojava deepTools circosJS containers salmon react-plotly.js