bwa

bioinformatics

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

How to download and setup bwa

Open terminal and run command

git clone https://github.com/lh3/bwa.git

git clone is used to create a copy or clone of bwa repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with bwa https://github.com/lh3/bwa/archive/master.zip

Or simply clone bwa with SSH

[email protected]:lh3/bwa.git

If you have some problems with bwa

You may open issue on bwa support forum (system) here: https://github.com/lh3/bwa/issues

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