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minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences

How to download and setup minimap2

Open terminal and run command
git clone https://github.com/lh3/minimap2.git
git clone is used to create a copy or clone of minimap2 repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with minimap2 https://github.com/lh3/minimap2/archive/master.zip

Or simply clone minimap2 with SSH
[email protected]:lh3/minimap2.git

If you have some problems with minimap2

You may open issue on minimap2 support forum (system) here: https://github.com/lh3/minimap2/issues

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