powsimR
Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially expressed genes. PowsimR is a flexible tool to simulate and evaluate differential expression from bulk and especially single-cell RNA-seq data making it suitable for a priori and posterior power analyses.
How to download and setup powsimR
Open terminal and run command
git clone https://github.com/bvieth/powsimR.git
git clone is used to create a copy or clone of powsimR repositories.
You pass git clone a repository URL. it supports a few different network protocols and corresponding URL formats.
Also you may download zip file with powsimR https://github.com/bvieth/powsimR/archive/master.zip
Or simply clone powsimR with SSH
[email protected]:bvieth/powsimR.git
If you have some problems with powsimR
You may open issue on powsimR support forum (system) here: https://github.com/bvieth/powsimR/issuesSimilar to powsimR repositories
Here you may see powsimR alternatives and analogs
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