14 Forks
41 Stars
41 Watchers

MetaSRA-pipeline

MetaSRA: normalized sample-specific metadata for the Sequence Read Archive

How to download and setup MetaSRA-pipeline

Open terminal and run command
git clone https://github.com/deweylab/MetaSRA-pipeline.git
git clone is used to create a copy or clone of MetaSRA-pipeline repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with MetaSRA-pipeline https://github.com/deweylab/MetaSRA-pipeline/archive/master.zip

Or simply clone MetaSRA-pipeline with SSH
[email protected]:deweylab/MetaSRA-pipeline.git

If you have some problems with MetaSRA-pipeline

You may open issue on MetaSRA-pipeline support forum (system) here: https://github.com/deweylab/MetaSRA-pipeline/issues

Similar to MetaSRA-pipeline repositories

Here you may see MetaSRA-pipeline alternatives and analogs

 cs-video-courses    fastp    dash    deepvariant    awesome-single-cell    nextflow    bwa    khmer    Awesome-Bioinformatics    galaxy    gatk    seqtk    bioconda-recipes    MultiQC    hail    minimap2    scipipe    nucleus    bioawk    cromwell    vsearch    sambamba    jbrowse    bionode    csvtk    biojava    deepTools    circosJS    containers    salmon