How to download and setup abyss
Open terminal and run command
git clone https://github.com/bcgsc/abyss.git
git clone is used to create a copy or clone of abyss repositories.
You pass git clone a repository URL. it supports a few different network protocols and corresponding URL formats.
Also you may download zip file with abyss https://github.com/bcgsc/abyss/archive/master.zip
Or simply clone abyss with SSH
[email protected]:bcgsc/abyss.git
If you have some problems with abyss
You may open issue on abyss support forum (system) here: https://github.com/bcgsc/abyss/issuesSimilar to abyss repositories
Here you may see abyss alternatives and analogs
cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon