haploclique
Viral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletions from NGS data.
How to download and setup haploclique
Open terminal and run command
git clone https://github.com/cbg-ethz/haploclique.git
git clone is used to create a copy or clone of haploclique repositories.
You pass git clone a repository URL. it supports a few different network protocols and corresponding URL formats.
Also you may download zip file with haploclique https://github.com/cbg-ethz/haploclique/archive/master.zip
Or simply clone haploclique with SSH
[email protected]:cbg-ethz/haploclique.git
If you have some problems with haploclique
You may open issue on haploclique support forum (system) here: https://github.com/cbg-ethz/haploclique/issuesSimilar to haploclique repositories
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