172 Forks
596 Stars
596 Watchers

jcvi

Python library to facilitate genome assembly, annotation, and comparative genomics

How to download and setup jcvi

Open terminal and run command
git clone https://github.com/tanghaibao/jcvi.git
git clone is used to create a copy or clone of jcvi repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with jcvi https://github.com/tanghaibao/jcvi/archive/master.zip

Or simply clone jcvi with SSH
[email protected]:tanghaibao/jcvi.git

If you have some problems with jcvi

You may open issue on jcvi support forum (system) here: https://github.com/tanghaibao/jcvi/issues

Similar to jcvi repositories

Here you may see jcvi alternatives and analogs

 cs-video-courses    fastp    dash    deepvariant    awesome-single-cell    nextflow    bwa    khmer    Awesome-Bioinformatics    galaxy    gatk    seqtk    bioconda-recipes    MultiQC    hail    minimap2    scipipe    nucleus    bioawk    cromwell    vsearch    sambamba    jbrowse    bionode    csvtk    biojava    deepTools    circosJS    containers    salmon