mixcr
                                MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
                            
                        How to download and setup mixcr
Open terminal and run command
                                            git clone https://github.com/milaboratory/mixcr.git
                                        
                                        git clone is used to create a copy or clone of mixcr repositories.
                                        You pass git clone a repository URL. it supports a few different network protocols and corresponding URL formats.
Also you may download zip file with mixcr https://github.com/milaboratory/mixcr/archive/master.zip
Or simply clone mixcr with SSH
                                            [email protected]:milaboratory/mixcr.git                                    
                                    If you have some problems with mixcr
You may open issue on mixcr support forum (system) here: https://github.com/milaboratory/mixcr/issuesSimilar to mixcr repositories
Here you may see mixcr alternatives and analogs
cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon