scanPAV

bioinformatics

Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.

How to download and setup scanPAV

Open terminal and run command

git clone https://github.com/wtsi-hpag/scanPAV.git

git clone is used to create a copy or clone of scanPAV repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with scanPAV https://github.com/wtsi-hpag/scanPAV/archive/master.zip

Or simply clone scanPAV with SSH

[email protected]:wtsi-hpag/scanPAV.git

If you have some problems with scanPAV

You may open issue on scanPAV support forum (system) here: https://github.com/wtsi-hpag/scanPAV/issues

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