seave
Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores and annotations from popular disease databases. Seave stores genomic variation of all types and sizes, and allows filtering for specific inheritance patterns, quality values, allele frequencies and gene lists. Seave is open source and deployable locally, or on a cloud computing provider, and works readily with gene panel, exome and whole genome data, scaling from single labs to multi-institution scale.
How to download and setup seave
Open terminal and run command
git clone https://github.com/KCCG/seave.git
git clone is used to create a copy or clone of seave repositories.
You pass git clone a repository URL. it supports a few different network protocols and corresponding URL formats.
Also you may download zip file with seave https://github.com/KCCG/seave/archive/master.zip
Or simply clone seave with SSH
[email protected]:KCCG/seave.git
If you have some problems with seave
You may open issue on seave support forum (system) here: https://github.com/KCCG/seave/issuesSimilar to seave repositories
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