GraffiTE

GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered polymorphisms in read sets using genome-graphs.

bioinformatics

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249 Stars

15 Forks

249 Watchers

R Language

other License

100 SrcLog Score

Cost to Build

$1.61M

Market Value

$6.09M

How is this calculated?

Growth over time

3 data points · 2023-02-01 → 2026-04-01

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What is the cgroza/GraffiTE GitHub project? Description: "GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered polymorphisms in read sets using genome-graphs.". Written in R. Explain what it does, its main use cases, key features, and who would benefit from using it.

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How to clone GraffiTE

Clone via HTTPS

git clone https://github.com/cgroza/GraffiTE.git

Clone via SSH

[email protected]:cgroza/GraffiTE.git

Download ZIP

Download master.zip

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