HiCExplorer
HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.
How to download and setup HiCExplorer
Open terminal and run command
git clone https://github.com/deeptools/HiCExplorer.git
git clone is used to create a copy or clone of HiCExplorer repositories.
You pass git clone a repository URL. it supports a few different network protocols and corresponding URL formats.
Also you may download zip file with HiCExplorer https://github.com/deeptools/HiCExplorer/archive/master.zip
Or simply clone HiCExplorer with SSH
[email protected]:deeptools/HiCExplorer.git
If you have some problems with HiCExplorer
You may open issue on HiCExplorer support forum (system) here: https://github.com/deeptools/HiCExplorer/issuesSimilar to HiCExplorer repositories
Here you may see HiCExplorer alternatives and analogs
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