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HiCExplorer

HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.

How to download and setup HiCExplorer

Open terminal and run command
git clone https://github.com/deeptools/HiCExplorer.git
git clone is used to create a copy or clone of HiCExplorer repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with HiCExplorer https://github.com/deeptools/HiCExplorer/archive/master.zip

Or simply clone HiCExplorer with SSH
[email protected]:deeptools/HiCExplorer.git

If you have some problems with HiCExplorer

You may open issue on HiCExplorer support forum (system) here: https://github.com/deeptools/HiCExplorer/issues

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