16 Forks
44 Stars
44 Watchers

HiC_pipeline

An easy-to-use Hi-C data processing software supporting distributed computation.

How to download and setup HiC_pipeline

Open terminal and run command
git clone https://github.com/XiaoTaoWang/HiC_pipeline.git
git clone is used to create a copy or clone of HiC_pipeline repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with HiC_pipeline https://github.com/XiaoTaoWang/HiC_pipeline/archive/master.zip

Or simply clone HiC_pipeline with SSH
[email protected]:XiaoTaoWang/HiC_pipeline.git

If you have some problems with HiC_pipeline

You may open issue on HiC_pipeline support forum (system) here: https://github.com/XiaoTaoWang/HiC_pipeline/issues

Similar to HiC_pipeline repositories

Here you may see HiC_pipeline alternatives and analogs

 cs-video-courses    fastp    dash    deepvariant    awesome-single-cell    nextflow    bwa    khmer    Awesome-Bioinformatics    galaxy    gatk    seqtk    bioconda-recipes    MultiQC    hail    minimap2    scipipe    nucleus    bioawk    cromwell    vsearch    sambamba    jbrowse    bionode    csvtk    biojava    deepTools    circosJS    containers    salmon