HoneyBADGER

bioinformatics

HMM-integrated Bayesian approach for detecting CNV and LOH events from single-cell RNA-seq data

How to download and setup HoneyBADGER

Open terminal and run command

git clone https://github.com/JEFworks-Lab/HoneyBADGER.git

git clone is used to create a copy or clone of HoneyBADGER repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with HoneyBADGER https://github.com/JEFworks-Lab/HoneyBADGER/archive/master.zip

Or simply clone HoneyBADGER with SSH

[email protected]:JEFworks-Lab/HoneyBADGER.git

If you have some problems with HoneyBADGER

You may open issue on HoneyBADGER support forum (system) here: https://github.com/JEFworks-Lab/HoneyBADGER/issues

Similar to HoneyBADGER repositories

Here you may see HoneyBADGER alternatives and analogs

cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon