MindTheGap

bioinformatics

MindTheGap is a SV caller for short read sequencing data dedicated to insertion variants (all sizes and types). It can also be used as a local assembly tool.

How to download and setup MindTheGap

Open terminal and run command

git clone https://github.com/GATB/MindTheGap.git

git clone is used to create a copy or clone of MindTheGap repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with MindTheGap https://github.com/GATB/MindTheGap/archive/master.zip

Or simply clone MindTheGap with SSH

[email protected]:GATB/MindTheGap.git

If you have some problems with MindTheGap

You may open issue on MindTheGap support forum (system) here: https://github.com/GATB/MindTheGap/issues

Similar to MindTheGap repositories

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