PyDESeq2

bioinformatics

A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

How to download and setup PyDESeq2

Open terminal and run command

git clone https://github.com/owkin/PyDESeq2.git

git clone is used to create a copy or clone of PyDESeq2 repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with PyDESeq2 https://github.com/owkin/PyDESeq2/archive/master.zip

Or simply clone PyDESeq2 with SSH

[email protected]:owkin/PyDESeq2.git

If you have some problems with PyDESeq2

You may open issue on PyDESeq2 support forum (system) here: https://github.com/owkin/PyDESeq2/issues

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