How to download and setup SLAT
Open terminal and run command
git clone https://github.com/gao-lab/SLAT.git
git clone is used to create a copy or clone of SLAT repositories.
You pass git clone a repository URL. it supports a few different network protocols and corresponding URL formats.
Also you may download zip file with SLAT https://github.com/gao-lab/SLAT/archive/master.zip
Or simply clone SLAT with SSH
[email protected]:gao-lab/SLAT.git
If you have some problems with SLAT
You may open issue on SLAT support forum (system) here: https://github.com/gao-lab/SLAT/issuesSimilar to SLAT repositories
Here you may see SLAT alternatives and analogs
cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon