Scaff10X

bioinformatics

Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads

How to download and setup Scaff10X

Open terminal and run command

git clone https://github.com/wtsi-hpag/Scaff10X.git

git clone is used to create a copy or clone of Scaff10X repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with Scaff10X https://github.com/wtsi-hpag/Scaff10X/archive/master.zip

Or simply clone Scaff10X with SSH

[email protected]:wtsi-hpag/Scaff10X.git

If you have some problems with Scaff10X

You may open issue on Scaff10X support forum (system) here: https://github.com/wtsi-hpag/Scaff10X/issues

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