10 Forks
39 Stars
39 Watchers

TwoPaCo

A fast constructor of the compressed de Bruijn graph from many genomes

How to download and setup TwoPaCo

Open terminal and run command
git clone https://github.com/medvedevgroup/TwoPaCo.git
git clone is used to create a copy or clone of TwoPaCo repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with TwoPaCo https://github.com/medvedevgroup/TwoPaCo/archive/master.zip

Or simply clone TwoPaCo with SSH
[email protected]:medvedevgroup/TwoPaCo.git

If you have some problems with TwoPaCo

You may open issue on TwoPaCo support forum (system) here: https://github.com/medvedevgroup/TwoPaCo/issues

Similar to TwoPaCo repositories

Here you may see TwoPaCo alternatives and analogs

 cs-video-courses    fastp    dash    deepvariant    awesome-single-cell    nextflow    bwa    khmer    Awesome-Bioinformatics    galaxy    gatk    seqtk    bioconda-recipes    MultiQC    hail    minimap2    scipipe    nucleus    bioawk    cromwell    vsearch    sambamba    jbrowse    bionode    csvtk    biojava    deepTools    circosJS    containers    salmon