13 Forks
115 Stars
115 Watchers

bedtk

A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)

How to download and setup bedtk

Open terminal and run command
git clone https://github.com/lh3/bedtk.git
git clone is used to create a copy or clone of bedtk repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with bedtk https://github.com/lh3/bedtk/archive/master.zip

Or simply clone bedtk with SSH
[email protected]:lh3/bedtk.git

If you have some problems with bedtk

You may open issue on bedtk support forum (system) here: https://github.com/lh3/bedtk/issues

Similar to bedtk repositories

Here you may see bedtk alternatives and analogs

 cs-video-courses    fastp    dash    deepvariant    awesome-single-cell    nextflow    bwa    khmer    Awesome-Bioinformatics    galaxy    gatk    seqtk    bioconda-recipes    MultiQC    hail    minimap2    scipipe    nucleus    bioawk    cromwell    vsearch    sambamba    jbrowse    bionode    csvtk    biojava    deepTools    circosJS    containers    salmon