decontam

bioinformatics

Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data

How to download and setup decontam

Open terminal and run command

git clone https://github.com/benjjneb/decontam.git

git clone is used to create a copy or clone of decontam repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with decontam https://github.com/benjjneb/decontam/archive/master.zip

Or simply clone decontam with SSH

[email protected]:benjjneb/decontam.git

If you have some problems with decontam

You may open issue on decontam support forum (system) here: https://github.com/benjjneb/decontam/issues

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