fasten

bioinformatics

:construction_worker: Fasten toolkit, for streaming operations on fastq files

How to download and setup fasten

Open terminal and run command

git clone https://github.com/lskatz/fasten.git

git clone is used to create a copy or clone of fasten repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with fasten https://github.com/lskatz/fasten/archive/master.zip

Or simply clone fasten with SSH

[email protected]:lskatz/fasten.git

If you have some problems with fasten

You may open issue on fasten support forum (system) here: https://github.com/lskatz/fasten/issues

Similar to fasten repositories

Here you may see fasten alternatives and analogs

cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon