fermi

lh3

A WGS de novo assembler based on the FMD-index for large genomes

bioinformatics

View on GitHub

74 Stars

15 Forks

12 Watchers

C Language

100 SrcLog Score

Cost to Build

$343.4K

Market Value

$514.4K

How is this calculated?

Growth over time

9 data points · 2021-08-01 → 2026-07-01

Stars Forks Watchers

💬

How do you feel about this project?

Ask AI about fermi

Question copied to clipboard

What is the lh3/fermi GitHub project? Description: "A WGS de novo assembler based on the FMD-index for large genomes". Written in C. Explain what it does, its main use cases, key features, and who would benefit from using it.

Question is copied to clipboard — paste it after the AI opens.

How to clone fermi

Clone via HTTPS

git clone https://github.com/lh3/fermi.git

Clone via SSH

[email protected]:lh3/fermi.git

Download ZIP

Download master.zip

Found an issue?

Report bugs or request features on the fermi issue tracker:

Open GitHub Issues

Similar to fermi

cs-video-courses dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch fastp sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon