15 Forks
74 Stars
74 Watchers

fermi

A WGS de novo assembler based on the FMD-index for large genomes

How to download and setup fermi

Open terminal and run command
git clone https://github.com/lh3/fermi.git
git clone is used to create a copy or clone of fermi repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with fermi https://github.com/lh3/fermi/archive/master.zip

Or simply clone fermi with SSH
[email protected]:lh3/fermi.git

If you have some problems with fermi

You may open issue on fermi support forum (system) here: https://github.com/lh3/fermi/issues

Similar to fermi repositories

Here you may see fermi alternatives and analogs

 cs-video-courses    fastp    dash    deepvariant    awesome-single-cell    nextflow    bwa    khmer    Awesome-Bioinformatics    galaxy    gatk    seqtk    bioconda-recipes    MultiQC    hail    minimap2    scipipe    nucleus    bioawk    cromwell    vsearch    sambamba    jbrowse    bionode    csvtk    biojava    deepTools    circosJS    containers    salmon