fermikit

bioinformatics

De novo assembly based variant calling pipeline for Illumina short reads

How to download and setup fermikit

Open terminal and run command

git clone https://github.com/lh3/fermikit.git

git clone is used to create a copy or clone of fermikit repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with fermikit https://github.com/lh3/fermikit/archive/master.zip

Or simply clone fermikit with SSH

[email protected]:lh3/fermikit.git

If you have some problems with fermikit

You may open issue on fermikit support forum (system) here: https://github.com/lh3/fermikit/issues

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