gblastn
G-BLASTN is a GPU-accelerated nucleotide alignment tool based on the widely used NCBI-BLAST.
How to download and setup gblastn
Open terminal and run command
git clone https://github.com/OpenHero/gblastn.git
git clone is used to create a copy or clone of gblastn repositories.
You pass git clone a repository URL. it supports a few different network protocols and corresponding URL formats.
Also you may download zip file with gblastn https://github.com/OpenHero/gblastn/archive/master.zip
Or simply clone gblastn with SSH
[email protected]:OpenHero/gblastn.git
If you have some problems with gblastn
You may open issue on gblastn support forum (system) here: https://github.com/OpenHero/gblastn/issuesSimilar to gblastn repositories
Here you may see gblastn alternatives and analogs
cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon