gfapy

bioinformatics

Gfapy: a flexible and extensible software library for handling sequence graphs in Python

How to download and setup gfapy

Open terminal and run command

git clone https://github.com/ggonnella/gfapy.git

git clone is used to create a copy or clone of gfapy repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with gfapy https://github.com/ggonnella/gfapy/archive/master.zip

Or simply clone gfapy with SSH

[email protected]:ggonnella/gfapy.git

If you have some problems with gfapy

You may open issue on gfapy support forum (system) here: https://github.com/ggonnella/gfapy/issues

Similar to gfapy repositories

Here you may see gfapy alternatives and analogs

cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon