gubbins

bioinformatics

Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins

How to download and setup gubbins

Open terminal and run command

git clone https://github.com/nickjcroucher/gubbins.git

git clone is used to create a copy or clone of gubbins repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with gubbins https://github.com/nickjcroucher/gubbins/archive/master.zip

Or simply clone gubbins with SSH

[email protected]:nickjcroucher/gubbins.git

If you have some problems with gubbins

You may open issue on gubbins support forum (system) here: https://github.com/nickjcroucher/gubbins/issues

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