21 Forks
100 Stars
100 Watchers

hAMRonization

Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure

How to download and setup hAMRonization

Open terminal and run command
git clone https://github.com/pha4ge/hAMRonization.git
git clone is used to create a copy or clone of hAMRonization repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with hAMRonization https://github.com/pha4ge/hAMRonization/archive/master.zip

Or simply clone hAMRonization with SSH
[email protected]:pha4ge/hAMRonization.git

If you have some problems with hAMRonization

You may open issue on hAMRonization support forum (system) here: https://github.com/pha4ge/hAMRonization/issues

Similar to hAMRonization repositories

Here you may see hAMRonization alternatives and analogs

 cs-video-courses    fastp    dash    deepvariant    awesome-single-cell    nextflow    bwa    khmer    Awesome-Bioinformatics    galaxy    gatk    seqtk    bioconda-recipes    MultiQC    hail    minimap2    scipipe    nucleus    bioawk    cromwell    vsearch    sambamba    jbrowse    bionode    csvtk    biojava    deepTools    circosJS    containers    salmon