hickit

bioinformatics

TAD calling, phase imputation, 3D modeling and more for diploid single-cell Hi-C (Dip-C) and general Hi-C

How to download and setup hickit

Open terminal and run command

git clone https://github.com/lh3/hickit.git

git clone is used to create a copy or clone of hickit repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with hickit https://github.com/lh3/hickit/archive/master.zip

Or simply clone hickit with SSH

[email protected]:lh3/hickit.git

If you have some problems with hickit

You may open issue on hickit support forum (system) here: https://github.com/lh3/hickit/issues

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