watchdog

bioinformatics

Workflow management system for the automated and distributed analysis of large-scale experimental data.

How to download and setup watchdog

Open terminal and run command

git clone https://github.com/klugem/watchdog.git

git clone is used to create a copy or clone of watchdog repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with watchdog https://github.com/klugem/watchdog/archive/master.zip

Or simply clone watchdog with SSH

[email protected]:klugem/watchdog.git

If you have some problems with watchdog

You may open issue on watchdog support forum (system) here: https://github.com/klugem/watchdog/issues

Similar to watchdog repositories

Here you may see watchdog alternatives and analogs

cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon