ksw2

bioinformatics

Global alignment and alignment extension

How to download and setup ksw2

Open terminal and run command

git clone https://github.com/lh3/ksw2.git

git clone is used to create a copy or clone of ksw2 repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with ksw2 https://github.com/lh3/ksw2/archive/master.zip

Or simply clone ksw2 with SSH

[email protected]:lh3/ksw2.git

If you have some problems with ksw2

You may open issue on ksw2 support forum (system) here: https://github.com/lh3/ksw2/issues

Similar to ksw2 repositories

Here you may see ksw2 alternatives and analogs

cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon