minipileup

lh3

Simple pileup-based variant caller

bioinformatics

View on GitHub

95 Stars

10 Forks

3 Watchers

C Language

mit License

100 SrcLog Score

Cost to Build

$8.0K

Market Value

$14.7K

How is this calculated?

Growth over time

7 data points · 2026-04-09 → 2026-09-25

Stars Forks Watchers

💬

How do you feel about this project?

Ask AI about minipileup

Question copied to clipboard

What is the lh3/minipileup GitHub project? Description: "Simple pileup-based variant caller". Written in C. Explain what it does, its main use cases, key features, and who would benefit from using it.

Question is copied to clipboard — paste it after the AI opens.

How to clone minipileup

Clone via HTTPS

git clone https://github.com/lh3/minipileup.git

Clone via SSH

[email protected]:lh3/minipileup.git

Download ZIP

Download master.zip

Found an issue?

Report bugs or request features on the minipileup issue tracker:

Open GitHub Issues

Similar to minipileup

cs-video-courses dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch fastp sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon