mixscape_seurat

A Snakemake workflow and MrBiomics module for performing perturbation analyses of pooled (multimodal) CRISPR screens with sc/snRNA-seq read-out (scCRISPR-seq) powered by the R package Seurat's method Mixscape.

bioinformatics

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56 Stars

2 Forks

56 Watchers

R Language

mit License

100 SrcLog Score

Cost to Build

$3.1K

Market Value

$6.8K

How is this calculated?

Growth over time

3 data points · 2026-04-09 → 2026-04-23

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What is the epigen/mixscape_seurat GitHub project? Description: "A Snakemake workflow and MrBiomics module for performing perturbation analyses of pooled (multimodal) CRISPR screens with sc/snRNA-seq read-out (scCRISPR-seq) powered by the R package Seurat's method Mixscape.". Written in R. Explain what it does, its main use cases, key features, and who would benefit from using it.

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How to clone mixscape_seurat

Clone via HTTPS

git clone https://github.com/epigen/mixscape_seurat.git

Clone via SSH

[email protected]:epigen/mixscape_seurat.git

Download ZIP

Download master.zip

Found an issue?

Report bugs or request features on the mixscape_seurat issue tracker:

Open GitHub Issues

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