multitax
Python package to obtain, parse and explore biological taxonomies (GTDB, NCBI, Silva, Greengenes, OTT)
How to download and setup multitax
Open terminal and run command
git clone https://github.com/pirovc/multitax.git
git clone is used to create a copy or clone of multitax repositories.
You pass git clone a repository URL. it supports a few different network protocols and corresponding URL formats.
Also you may download zip file with multitax https://github.com/pirovc/multitax/archive/master.zip
Or simply clone multitax with SSH
[email protected]:pirovc/multitax.git
If you have some problems with multitax
You may open issue on multitax support forum (system) here: https://github.com/pirovc/multitax/issuesSimilar to multitax repositories
Here you may see multitax alternatives and analogs
cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon