netSmooth

bioinformatics

netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation

How to download and setup netSmooth

Open terminal and run command

git clone https://github.com/BIMSBbioinfo/netSmooth.git

git clone is used to create a copy or clone of netSmooth repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with netSmooth https://github.com/BIMSBbioinfo/netSmooth/archive/master.zip

Or simply clone netSmooth with SSH

[email protected]:BIMSBbioinfo/netSmooth.git

If you have some problems with netSmooth

You may open issue on netSmooth support forum (system) here: https://github.com/BIMSBbioinfo/netSmooth/issues

Similar to netSmooth repositories

Here you may see netSmooth alternatives and analogs

cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon