pyani

bioinformatics

Application and Python module for average nucleotide identity analyses of microbes.

How to download and setup pyani

Open terminal and run command

git clone https://github.com/widdowquinn/pyani.git

git clone is used to create a copy or clone of pyani repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with pyani https://github.com/widdowquinn/pyani/archive/master.zip

Or simply clone pyani with SSH

[email protected]:widdowquinn/pyani.git

If you have some problems with pyani

You may open issue on pyani support forum (system) here: https://github.com/widdowquinn/pyani/issues

Similar to pyani repositories

Here you may see pyani alternatives and analogs

cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon