muscle
Multiple sequence alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.
How to download and setup muscle
Open terminal and run command
git clone https://github.com/rcedgar/muscle.git
git clone is used to create a copy or clone of muscle repositories.
You pass git clone a repository URL. it supports a few different network protocols and corresponding URL formats.
Also you may download zip file with muscle https://github.com/rcedgar/muscle/archive/master.zip
Or simply clone muscle with SSH
[email protected]:rcedgar/muscle.git
If you have some problems with muscle
You may open issue on muscle support forum (system) here: https://github.com/rcedgar/muscle/issuesSimilar to muscle repositories
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